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Algorithms for Computational Biology [electronic resource] : Third International Conference, AlCoB 2016, Trujillo, Spain, June 21-22, 2016, Proceedings / edited by Mar�ia Bot�on-Fern�andez, Carlos Mart�in-Vide, Sergio Santander-Jim�enez, Miguel A. Vega-Rodr�iguez.

Contributor(s): Bot�on-Fern�andez, Mar�ia [editor.] | Mart�in-Vide, Carlos [editor.] | Santander-Jim�enez, Sergio [editor.] | Vega-Rodr�iguez, Miguel A [editor.] | SpringerLink (Online service).
Material type: materialTypeLabelBookSeries: Lecture Notes in Computer Science: 9702Publisher: Cham : Springer International Publishing : Imprint: Springer, 2016Description: X, 183 p. 46 illus. online resource.Content type: text Media type: computer Carrier type: online resourceISBN: 9783319388274.Subject(s): Computer science | Algorithms | Computer science -- Mathematics | Data mining | Bioinformatics | Biomathematics | Computer Science | Computational Biology/Bioinformatics | Algorithm Analysis and Problem Complexity | Discrete Mathematics in Computer Science | Data Mining and Knowledge Discovery | Mathematical and Computational BiologyAdditional physical formats: Printed edition:: No titleDDC classification: 570.285 Online resources: Click here to access online
Contents:
The Trees in the Peaks -- Relating Bisimulations with Attractors in Boolean Network Models -- Neural Network Simulation of Feeding Adaptations of Daphnia -- Generating the Logicome of a Biological Network -- Counting, Generating and Sampling Tree Alignments -- A New Multi-Objective Approach for Molecular Docking Based on RMSD and Binding Energy -- Gibbs/MCMC Sampling for Multiple RNA Interaction with Sub-optimal Solutions -- Accumulated Coalescence Rank and Excess Gene Count for Species Tree Inference -- Bootstrapping Algorithms for Gene Duplication and Speciation Events -- Robustness of the Parsimonious Reconciliation Method in Cophylogeny -- Sorting with Forbidden Intermediates -- Evaluation and Improvement of Fast Algorithms for Exact Matching on Genome Sequences -- Identification of Variant Compositions in Related Strains without Reference -- New Error Tolerant Method for Search of Long Repeats in DNA Sequences.
In: Springer eBooksSummary: This book constitutes the proceedings of the Third International Conference on Algorithms for Computational Biology, AlCoB 2016, held in Trujillo, Spain, in June 2016. The 13 full papers presented in this volume were carefully reviewed and selected from 23 submissions. They are organized in the following topical sections: biological networks and modelling; biological structure processing; phylogenetics; and sequence analysis and rearrangement. In addition one invited talk is included.
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The Trees in the Peaks -- Relating Bisimulations with Attractors in Boolean Network Models -- Neural Network Simulation of Feeding Adaptations of Daphnia -- Generating the Logicome of a Biological Network -- Counting, Generating and Sampling Tree Alignments -- A New Multi-Objective Approach for Molecular Docking Based on RMSD and Binding Energy -- Gibbs/MCMC Sampling for Multiple RNA Interaction with Sub-optimal Solutions -- Accumulated Coalescence Rank and Excess Gene Count for Species Tree Inference -- Bootstrapping Algorithms for Gene Duplication and Speciation Events -- Robustness of the Parsimonious Reconciliation Method in Cophylogeny -- Sorting with Forbidden Intermediates -- Evaluation and Improvement of Fast Algorithms for Exact Matching on Genome Sequences -- Identification of Variant Compositions in Related Strains without Reference -- New Error Tolerant Method for Search of Long Repeats in DNA Sequences.

This book constitutes the proceedings of the Third International Conference on Algorithms for Computational Biology, AlCoB 2016, held in Trujillo, Spain, in June 2016. The 13 full papers presented in this volume were carefully reviewed and selected from 23 submissions. They are organized in the following topical sections: biological networks and modelling; biological structure processing; phylogenetics; and sequence analysis and rearrangement. In addition one invited talk is included.

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