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Combinatorial Pattern Matching [electronic resource] : 21st Annual Symposium, CPM 2010, New York, NY, USA, June 21-23, 2010, Proceedings, / edited by Amihood Amir, Laxmi Parida.

Contributor(s): Amir, Amihood [editor.] | Parida, Laxmi [editor.] | SpringerLink (Online service).
Material type: materialTypeLabelBookSeries: Theoretical Computer Science and General Issues: 6129Publisher: Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2010Edition: 1st ed. 2010.Description: XIII, 362 p. 84 illus. online resource.Content type: text Media type: computer Carrier type: online resourceISBN: 9783642135095.Subject(s): Pattern recognition systems | Life sciences | Computer programming | Algorithms | Artificial intelligence -- Data processing | Data mining | Automated Pattern Recognition | Life Sciences | Programming Techniques | Algorithms | Data Science | Data Mining and Knowledge DiscoveryAdditional physical formats: Printed edition:: No title; Printed edition:: No titleDDC classification: 006.4 Online resources: Click here to access online
Contents:
Algorithms for Forest Pattern Matching -- Affine Image Matching Is Uniform -Complete -- Old and New in Stringology -- Small-Space 2D Compressed Dictionary Matching -- Bidirectional Search in a String with Wavelet Trees -- A Minimal Periods Algorithm with Applications -- The Property Suffix Tree with Dynamic Properties -- Approximate All-Pairs Suffix/Prefix Overlaps -- Succinct Dictionary Matching with No Slowdown -- Pseudo-realtime Pattern Matching: Closing the Gap -- Breakpoint Distance and PQ-Trees -- On the Parameterized Complexity of Some Optimization Problems Related to Multiple-Interval Graphs -- Succinct Representations of Separable Graphs -- Implicit Hitting Set Problems and Multi-genome Alignment -- Bounds on the Minimum Mosaic of Population Sequences under Recombination -- The Highest Expected Reward Decoding for HMMs with Application to Recombination Detection -- Phylogeny- and Parsimony-Based Haplotype Inference with Constraints -- Faster Computation of the Robinson-Foulds Distance between Phylogenetic Networks -- Mod/Resc Parsimony Inference -- Extended Islands of Tractability for Parsimony Haplotyping -- Sampled Longest Common Prefix Array -- Verifying a Parameterized Border Array in O(n 1.5) Time -- Cover Array String Reconstruction -- Compression, Indexing, and Retrieval for Massive String Data -- Building the Minimal Automaton of A * X in Linear Time, When X Is of Bounded Cardinality -- A Compact Representation of Nondeterministic (Suffix) Automata for the Bit-Parallel Approach -- Algorithms for Three Versions of the Shortest Common Superstring Problem -- Finding Optimal Alignment and Consensus of Circular Strings -- Optimizing Restriction Site Placement for Synthetic Genomes -- Extension and Faster Implementation of the GRP Transform for Lossless Compression -- Parallel andDistributed Compressed Indexes.
In: Springer Nature eBook
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Algorithms for Forest Pattern Matching -- Affine Image Matching Is Uniform -Complete -- Old and New in Stringology -- Small-Space 2D Compressed Dictionary Matching -- Bidirectional Search in a String with Wavelet Trees -- A Minimal Periods Algorithm with Applications -- The Property Suffix Tree with Dynamic Properties -- Approximate All-Pairs Suffix/Prefix Overlaps -- Succinct Dictionary Matching with No Slowdown -- Pseudo-realtime Pattern Matching: Closing the Gap -- Breakpoint Distance and PQ-Trees -- On the Parameterized Complexity of Some Optimization Problems Related to Multiple-Interval Graphs -- Succinct Representations of Separable Graphs -- Implicit Hitting Set Problems and Multi-genome Alignment -- Bounds on the Minimum Mosaic of Population Sequences under Recombination -- The Highest Expected Reward Decoding for HMMs with Application to Recombination Detection -- Phylogeny- and Parsimony-Based Haplotype Inference with Constraints -- Faster Computation of the Robinson-Foulds Distance between Phylogenetic Networks -- Mod/Resc Parsimony Inference -- Extended Islands of Tractability for Parsimony Haplotyping -- Sampled Longest Common Prefix Array -- Verifying a Parameterized Border Array in O(n 1.5) Time -- Cover Array String Reconstruction -- Compression, Indexing, and Retrieval for Massive String Data -- Building the Minimal Automaton of A * X in Linear Time, When X Is of Bounded Cardinality -- A Compact Representation of Nondeterministic (Suffix) Automata for the Bit-Parallel Approach -- Algorithms for Three Versions of the Shortest Common Superstring Problem -- Finding Optimal Alignment and Consensus of Circular Strings -- Optimizing Restriction Site Placement for Synthetic Genomes -- Extension and Faster Implementation of the GRP Transform for Lossless Compression -- Parallel andDistributed Compressed Indexes.

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