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020 _a9783642404535
_9978-3-642-40453-5
024 7 _a10.1007/978-3-642-40453-5
_2doi
050 4 _aQH324.2-324.25
072 7 _aPSA
_2bicssc
072 7 _aUB
_2bicssc
072 7 _aCOM014000
_2bisacsh
082 0 4 _a570.285
_223
245 1 0 _aAlgorithms in Bioinformatics
_h[electronic resource] :
_b13th International Workshop, WABI 2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings /
_cedited by Aaron Darling, Jens Stoye.
264 1 _aBerlin, Heidelberg :
_bSpringer Berlin Heidelberg :
_bImprint: Springer,
_c2013.
300 _aXIV, 378 p. 97 illus.
_bonline resource.
336 _atext
_btxt
_2rdacontent
337 _acomputer
_bc
_2rdamedia
338 _aonline resource
_bcr
_2rdacarrier
347 _atext file
_bPDF
_2rda
490 1 _aLecture Notes in Computer Science,
_x0302-9743 ;
_v8126
505 0 _aExtending the Reach of  Phylogenetic Inference -- Protein (Multi-)Location Prediction: Using Location Inter-Dependencies in a Probabilistic Framework -- Towards Reliable Automatic Protein Structure Alignment -- A Minimum-Labeling Approach for Reconstructing Protein Networks across Multiple Conditions -- Faster mass decomposition -- On NP-Hardness of the Paired de Bruijn Sound Cycle Problem -- Accurate Decoding of Pooled Sequenced Data Using Compressed Sensing -- A Novel Combinatorial Method for Estimating Transcript Expression with RNA-Seq: Bounding the Number of Paths -- A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data -- Graph-Distance within RNA Secondary Structure Ensembles -- Faster Algorithms for RNA-folding using the Four-Russians method -- Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree -- The generalized Robinson-Foulds metric -- Computing the Skewness of the Phylogenetic Mean Pairwise Distance in Linear Time -- Characterizing Compatibility and Agreement of Unrooted Trees via Cuts in Graphs -- Unifying Parsimonious Tree -- Sibelia: A scalable and comprehensive synteny block generation tool for closely related microbial genomes -- On the matrix median problem -- Fixed-Parameter Algorithm for Minimum Common String Partition with Few Duplications -- MSARC: Multiple Sequence Alignment by Residue Clustering -- Mutual Enrichment in Ranked Lists and the Statistical Assessment of Position Weight Matrix Motifs -- Probabilistic Approaches to Alignment with Tandem Repeats -- Multiscale Identification of Topological Domains in Chromatin -- Modeling Intratumor Gene Copy Number Heterogeneity using Fluorescence in Situ Hybridization data -- Phylogenetic Analysis of Cell Types using Histone Modifications -- Detecting Superbubbles in Assembly Graphs -- A hybrid assembly using high throughput short and long -- Using cascading Bloom filters to improve the memory usage for de Bruijn graphs.
520 _aThis book constitutes the refereed proceedings of the 13th International Workshop on Algorithms in Bioinformatics, WABI 2013, held in Sophia Antipolis, France, in September 2013. WABI 2013 is one of seven workshops which, along with the European Symposium on Algorithms (ESA), constitute the ALGO annual meeting and highlights research in algorithmic work for bioinformatics, computational biology and systems biology. The goal is to present recent research results, including significant work-in-progress, and to identify and explore directions of future research. The 27 full papers presented were carefully reviewed and selected from 61 submissions. The papers cover all aspects of algorithms in bioinformatics, computational biology and systems biology.
650 0 _aComputer science.
650 0 _aComputers.
650 0 _aAlgorithms.
650 0 _aComputer science
_xMathematics.
650 0 _aMathematical statistics.
650 0 _aData mining.
650 0 _aBioinformatics.
650 1 4 _aComputer Science.
650 2 4 _aComputational Biology/Bioinformatics.
650 2 4 _aAlgorithm Analysis and Problem Complexity.
650 2 4 _aDiscrete Mathematics in Computer Science.
650 2 4 _aComputation by Abstract Devices.
650 2 4 _aData Mining and Knowledge Discovery.
650 2 4 _aProbability and Statistics in Computer Science.
700 1 _aDarling, Aaron.
_eeditor.
700 1 _aStoye, Jens.
_eeditor.
710 2 _aSpringerLink (Online service)
773 0 _tSpringer eBooks
776 0 8 _iPrinted edition:
_z9783642404528
830 0 _aLecture Notes in Computer Science,
_x0302-9743 ;
_v8126
856 4 0 _uhttp://dx.doi.org/10.1007/978-3-642-40453-5
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