000 03162nam a22005415i 4500
001 978-981-10-0591-6
003 DE-He213
005 20200421112548.0
007 cr nn 008mamaa
008 160302s2016 si | s |||| 0|eng d
020 _a9789811005916
_9978-981-10-0591-6
024 7 _a10.1007/978-981-10-0591-6
_2doi
050 4 _aTK7888.4
072 7 _aTJFC
_2bicssc
072 7 _aTEC008010
_2bisacsh
082 0 4 _a621.3815
_223
100 1 _aVarma, B. Sharat Chandra.
_eauthor.
245 1 0 _aArchitecture Exploration of FPGA Based Accelerators for BioInformatics Applications
_h[electronic resource] /
_cby B. Sharat Chandra Varma, Kolin Paul, M. Balakrishnan.
250 _a1st ed. 2016.
264 1 _aSingapore :
_bSpringer Singapore :
_bImprint: Springer,
_c2016.
300 _aXV, 122 p. 54 illus., 40 illus. in color.
_bonline resource.
336 _atext
_btxt
_2rdacontent
337 _acomputer
_bc
_2rdamedia
338 _aonline resource
_bcr
_2rdacarrier
347 _atext file
_bPDF
_2rda
490 1 _aSpringer Series in Advanced Microelectronics,
_x1437-0387 ;
_v55
505 0 _aIntroduction -- Related Work -- Methodology for Implementing Accelerators -- FPGA based Acceleration of Protein Docking -- FPGA based Acceleration of De Novo Genome Assembly -- Design of Accelerators with HEBs -- System Level Design Space Exploration -- Future Directions.
520 _aThis book presents an evaluation methodology to design future FPGA fabrics incorporating hard embedded blocks (HEBs) to accelerate applications. This methodology will be useful for selection of blocks to be embedded into the fabric and for evaluating the performance gain that can be achieved by such an embedding. The authors illustrate the use of their methodology by studying the impact of HEBs on two important bioinformatics applications: protein docking and genome assembly. The book also explains how the respective HEBs are designed and how hardware implementation of the application is done using these HEBs. It shows that significant speedups can be achieved over pure software implementations by using such FPGA-based accelerators. The methodology presented in this book may also be used for designing HEBs for accelerating software implementations in other domains besides bioinformatics. This book will prove useful to students, researchers, and practicing engineers alike.
650 0 _aEngineering.
650 0 _aBioinformatics.
650 0 _aElectronics.
650 0 _aMicroelectronics.
650 0 _aElectronic circuits.
650 1 4 _aEngineering.
650 2 4 _aCircuits and Systems.
650 2 4 _aComputational Biology/Bioinformatics.
650 2 4 _aElectronics and Microelectronics, Instrumentation.
700 1 _aPaul, Kolin.
_eauthor.
700 1 _aBalakrishnan, M.
_eauthor.
710 2 _aSpringerLink (Online service)
773 0 _tSpringer eBooks
776 0 8 _iPrinted edition:
_z9789811005893
830 0 _aSpringer Series in Advanced Microelectronics,
_x1437-0387 ;
_v55
856 4 0 _uhttp://dx.doi.org/10.1007/978-981-10-0591-6
912 _aZDB-2-ENG
942 _cEBK
999 _c58701
_d58701