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024 7 _a10.1007/978-3-030-85633-5
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082 0 4 _a570.285
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082 0 4 _a570.113
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245 1 0 _aComputational Methods in Systems Biology
_h[electronic resource] :
_b19th International Conference, CMSB 2021, Bordeaux, France, September 22-24, 2021, Proceedings /
_cedited by Eugenio Cinquemani, Loïc Paulevé.
250 _a1st ed. 2021.
264 1 _aCham :
_bSpringer International Publishing :
_bImprint: Springer,
_c2021.
300 _aXII, 281 p. 74 illus., 61 illus. in color.
_bonline resource.
336 _atext
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337 _acomputer
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338 _aonline resource
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490 1 _aLecture Notes in Bioinformatics,
_x2366-6331 ;
_v12881
505 0 _aReducing Boolean Networks with Backward Boolean Equivalence -- Abstraction of Markov Population Dynamics via Generative Adversarial Nets -- Greening R. Thomas' Framework with Environment Variables: a Divide and Conquer Approach -- Automated inference of production rules for glycans -- Compiling Elementary Mathematical Functions into Finite Chemical Reaction Networks via a Polynomialization Algorithm for ODEs -- Interpretable exact linear reductions via positivity -- Explainable artificial neural network for recurrent venous thromboembolism based on plasma proteomics -- Neural networks to predict survival from RNA-seq data in oncology -- Microbial Community Decision Making Models in Batchand Chemostat Cultures.-Learning Boolean controls in regulated metabolic networks: a case-study -- Population design for synthetic gene circuits -- Nonlinear pattern matching in rule-based modeling languages -- Protein noise and distribution in a two-stage gene-expression model extended by an mRNA inactivation loop -- Aeon 2021: Bifurcation Decision Trees in Boolean Networks -- LNetReduce: tool for reducing linear dynamic networks with separated time scales -- ppsim: A software package for efficiently simulating and visualizing population protocols -- Web-based Structural Identifiability Analyzer BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems.
520 _aThis book constitutes the refereed proceedings of the 19th International Conference on Computational Methods in Systems Biology, CMSB 2021, held in Bordeaux, France, September 22-24, 2021.* The 13 full papers and 5 tool papers were carefully reviewed and selected from 32 submissions. The topics of interest include biological process modelling; biological system model verification, validation, analysis, and simulation; high-performance computational systems biology; model inference from experimental data; multi-scale modeling and analysis methods; computational approaches for synthetic biology; machine learning and data-driven approaches; microbial ecology modelling and analysis; methods and protocols for populations and their variability; models, applications, and case studies in systems and synthetic biology. The chapters "Microbial Community Decision Making Models in Batch", "Population design for synthetic gene circuits", "BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems" are published open access under a CC BY license (Creative Commons Attribution 4.0 International License). * The conference was held in a hybrid mode due to the COVID-19 pandemic.
650 0 _aBioinformatics.
_99561
650 0 _aArtificial intelligence.
_93407
650 0 _aSoftware engineering.
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650 0 _aDatabase management.
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650 0 _aComputer science.
_99832
650 0 _aComputer networks .
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650 1 4 _aComputational and Systems Biology.
_931619
650 2 4 _aArtificial Intelligence.
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650 2 4 _aSoftware Engineering.
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650 2 4 _aDatabase Management System.
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650 2 4 _aTheory of Computation.
_983847
650 2 4 _aComputer Communication Networks.
_983848
700 1 _aCinquemani, Eugenio.
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700 1 _aPaulevé, Loïc.
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830 0 _aLecture Notes in Bioinformatics,
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